Protein Atlas

About Protein Atlas

Use Protein Atlas with your agent

claude mcp add --transport http protein-atlas https://gateway.pipeworx.io/protein-atlas/mcp

{
  "mcpServers": {
    "protein-atlas": {
      "url": "https://gateway.pipeworx.io/protein-atlas/mcp"
    }
  }
}

Frequently asked questions

What is Protein Atlas?

Protein Atlas is an MCP (Model Context Protocol) server by pipeworx-io. Human Protein Atlas (HPA) MCP — keyless.

How do I connect Protein Atlas to Claude, Cursor, or another MCP client?

Protein Atlas is a remote MCP server — add its endpoint (https://gateway.pipeworx.io/protein-atlas/mcp) to your client's MCP configuration (for example with "claude mcp add", or under "mcpServers" in Cursor's mcp.json) and restart the client.

Is Protein Atlas open source?

Yes — the source code is public at github.com/pipeworx-io/mcp-protein-atlas.

Can AI agents pay to use Protein Atlas?

Not yet through Loomal — Protein Atlas is listed as a free directory entry. If its maintainer verifies ownership, they can set per-call USDC pricing that agents pay over x402, with settlement on Base.