Biosamples is an MCP (Model Context Protocol) server by pipeworx-io. EBI BioSamples MCP.

How do I connect Biosamples to Claude, Cursor, or another MCP client?

Biosamples is a remote MCP server — add its endpoint (https://gateway.pipeworx.io/biosamples/mcp) to your client's MCP configuration (for example with "claude mcp add", or under "mcpServers" in Cursor's mcp.json) and restart the client.

Is Biosamples open source?

Yes — the source code is public at github.com/pipeworx-io/mcp-biosamples.

Can AI agents pay to use Biosamples?

Not yet through Loomal — Biosamples is listed as a free directory entry. If its maintainer verifies ownership, they can set per-call USDC pricing that agents pay over x402, with settlement on Base.

Biosamples

MCP server by github.com/pipeworx-io/mcp-biosamples

EBI BioSamples MCP.

0 starsRemote-capable

About Biosamples

Biosamples is an MCP (Model Context Protocol) server published by pipeworx-io in the official MCP registry. EBI BioSamples MCP.

Biosamples runs as a hosted remote over streamable-http — MCP clients connect directly to its endpoint, with nothing to install locally.

Development happens in the open at github.com/pipeworx-io/mcp-biosamples.

Use Biosamples with your agent

Claude Code · one command

claude mcp add --transport http biosamples https://gateway.pipeworx.io/biosamples/mcp

Claude Desktop, Cursor & other MCP clients · config

{
  "mcpServers": {
    "biosamples": {
      "url": "https://gateway.pipeworx.io/biosamples/mcp"
    }
  }
}

streamable-httphttps://gateway.pipeworx.io/biosamples/mcp

Frequently asked questions

What is Biosamples?: Biosamples is an MCP (Model Context Protocol) server by pipeworx-io. EBI BioSamples MCP.
How do I connect Biosamples to Claude, Cursor, or another MCP client?: Biosamples is a remote MCP server — add its endpoint (https://gateway.pipeworx.io/biosamples/mcp) to your client's MCP configuration (for example with "claude mcp add", or under "mcpServers" in Cursor's mcp.json) and restart the client.
Is Biosamples open source?: Yes — the source code is public at github.com/pipeworx-io/mcp-biosamples.
Can AI agents pay to use Biosamples?: Not yet through Loomal — Biosamples is listed as a free directory entry. If its maintainer verifies ownership, they can set per-call USDC pricing that agents pay over x402, with settlement on Base.

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Listing data from the official MCP registry and GitHub, refreshed periodically. Not affiliated with the maintainer unless claimed. Maintain Biosamples? Claim this listing free by verifying GitHub ownership, or contact us.